Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Timm23-208ENSMUST00000226683 750 ntBASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Lsm7Q9CQQ8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Lsm7Q9CQQ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Lsm7Q9CQQ8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lsm7Q9CQQ8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Lsm7Q9CQQ8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lsm7Q9CQQ8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Gm15565-201ENSMUST00000118890 427 ntBASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Odf3b-204ENSMUST00000227834 930 ntBASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.92■□□□□ 0.46
Lsm7Q9CQQ8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lsm7Q9CQQ8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Gm21814-202ENSMUST00000203277 873 ntBASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm7Q9CQQ8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms