Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Gm37055-201ENSMUST00000191866 133 ntBASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Fst-202ENSMUST00000223640 2612 ntBASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.41■□□□□ 0.54
Lysmd3Q99LE3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.4■□□□□ 0.54
Lysmd3Q99LE3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd3Q99LE3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd3Q99LE3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd3Q99LE3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Lysmd3Q99LE3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lysmd3Q99LE3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Gm11643-201ENSMUST00000119578 864 ntBASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lysmd3Q99LE3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lysmd3Q99LE3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
Lysmd3Q99LE3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.35■□□□□ 0.53
Lysmd3Q99LE3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms