Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfc4Q99J62 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfc4Q99J62 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc4Q99J62 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rfc4Q99J62 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfc4Q99J62 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Gm25016-201ENSMUST00000158399 131 ntBASIC20.46■□□□□ 0.87
Rfc4Q99J62 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfc4Q99J62 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Gm9103-201ENSMUST00000119371 405 ntBASIC20.45■□□□□ 0.86
Rfc4Q99J62 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfc4Q99J62 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.44■□□□□ 0.86
Rfc4Q99J62 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Ank2-226ENSMUST00000189368 339 ntBASIC20.44■□□□□ 0.86
Rfc4Q99J62 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfc4Q99J62 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rfc4Q99J62 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.43■□□□□ 0.86
Rfc4Q99J62 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Gm16061-201ENSMUST00000122167 857 ntBASIC20.43■□□□□ 0.86
Rfc4Q99J62 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfc4Q99J62 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms