Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Cacna1dQ99246 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Gm10819-201ENSMUST00000099988 561 ntBASIC17.67■□□□□ 0.42
Cacna1dQ99246 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1dQ99246 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.66■□□□□ 0.42
Cacna1dQ99246 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cacna1dQ99246 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1dQ99246 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cacna1dQ99246 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1dQ99246 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1dQ99246 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1dQ99246 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1dQ99246 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1dQ99246 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.64■□□□□ 0.41
Cacna1dQ99246 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1dQ99246 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Tgds-204ENSMUST00000228543 1594 ntBASIC17.63■□□□□ 0.41
Cacna1dQ99246 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.63■□□□□ 0.41
Cacna1dQ99246 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1dQ99246 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cacna1dQ99246 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1dQ99246 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1dQ99246 Gm10517-202ENSMUST00000192970 758 ntBASIC17.62■□□□□ 0.41
Cacna1dQ99246 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1dQ99246 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1dQ99246 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1dQ99246 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms