Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Gm43183-201ENSMUST00000200632 547 ntBASIC20.44■□□□□ 0.86
Smc1bQ920F6 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.44■□□□□ 0.86
Smc1bQ920F6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.44■□□□□ 0.86
Smc1bQ920F6 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.44■□□□□ 0.86
Smc1bQ920F6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.43■□□□□ 0.86
Smc1bQ920F6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.43■□□□□ 0.86
Smc1bQ920F6 Gm11539-201ENSMUST00000119837 557 ntBASIC20.43■□□□□ 0.86
Smc1bQ920F6 Gm13436-201ENSMUST00000120418 567 ntBASIC20.43■□□□□ 0.86
Smc1bQ920F6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Smc1bQ920F6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.42■□□□□ 0.86
Smc1bQ920F6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smc1bQ920F6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Gm7889-201ENSMUST00000185591 958 ntBASIC20.41■□□□□ 0.86
Smc1bQ920F6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smc1bQ920F6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.4■□□□□ 0.86
Smc1bQ920F6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smc1bQ920F6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1bQ920F6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Smc1bQ920F6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1bQ920F6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smc1bQ920F6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Smc1bQ920F6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smc1bQ920F6 Odf3b-204ENSMUST00000227834 930 ntBASIC20.39■□□□□ 0.85
Smc1bQ920F6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smc1bQ920F6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms