Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh18Q8VHR0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.11■□□□□ 0.33
Pcdh18Q8VHR0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh18Q8VHR0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh18Q8VHR0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh18Q8VHR0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh18Q8VHR0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh18Q8VHR0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.08■□□□□ 0.32
Pcdh18Q8VHR0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms