Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Ddx39aQ8VDW0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Gm10231-201ENSMUST00000181584 441 ntBASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Gm10175-202ENSMUST00000208752 441 ntBASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ddx39aQ8VDW0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ddx39aQ8VDW0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ddx39aQ8VDW0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 Gm7889-201ENSMUST00000185591 958 ntBASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx39aQ8VDW0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Fst-202ENSMUST00000223640 2612 ntBASIC19.7■□□□□ 0.74
Ddx39aQ8VDW0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx39aQ8VDW0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx39aQ8VDW0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx39aQ8VDW0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx39aQ8VDW0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.69■□□□□ 0.74
Ddx39aQ8VDW0 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.69■□□□□ 0.74
Ddx39aQ8VDW0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx39aQ8VDW0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms