Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
H2afjQ8R1M2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Gm42642-201ENSMUST00000200683 355 ntBASIC16.53■□□□□ 0.24
H2afjQ8R1M2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afjQ8R1M2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Gm5874-201ENSMUST00000096101 508 ntBASIC16.52■□□□□ 0.24
H2afjQ8R1M2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
H2afjQ8R1M2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
H2afjQ8R1M2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afjQ8R1M2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afjQ8R1M2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afjQ8R1M2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afjQ8R1M2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Gm7514-201ENSMUST00000209475 934 ntBASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.51■□□□□ 0.23
H2afjQ8R1M2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afjQ8R1M2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Gm6420-201ENSMUST00000193885 723 ntBASIC16.49■□□□□ 0.23
H2afjQ8R1M2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afjQ8R1M2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afjQ8R1M2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms