Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim2Q8R1G6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdlim2Q8R1G6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim2Q8R1G6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim2Q8R1G6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pdlim2Q8R1G6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdlim2Q8R1G6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim2Q8R1G6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim2Q8R1G6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim2Q8R1G6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim2Q8R1G6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim2Q8R1G6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pdlim2Q8R1G6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Gm22238-201ENSMUST00000175222 88 ntBASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Mir8112-201ENSMUST00000184382 131 ntBASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pdlim2Q8R1G6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pdlim2Q8R1G6 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.38■□□□□ 0.85
Pdlim2Q8R1G6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms