Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Paf1Q8K2T8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.78■□□□□ 0.92
Paf1Q8K2T8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Paf1Q8K2T8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.77■□□□□ 0.92
Paf1Q8K2T8 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.77■□□□□ 0.92
Paf1Q8K2T8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Paf1Q8K2T8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.77■□□□□ 0.92
Paf1Q8K2T8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Paf1Q8K2T8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Grk6-206ENSMUST00000224995 2971 ntBASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Paf1Q8K2T8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Paf1Q8K2T8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.74■□□□□ 0.91
Paf1Q8K2T8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Paf1Q8K2T8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Paf1Q8K2T8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Paf1Q8K2T8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms