Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Mir1668-201ENSMUST00000184114 107 ntBASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtn4rl1Q8K0S5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm27389-201ENSMUST00000183622 195 ntBASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rtn4rl1Q8K0S5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.98■□□□□ 0.47
Rtn4rl1Q8K0S5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm29518-201ENSMUST00000190858 372 ntBASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm29791-202ENSMUST00000207888 369 ntBASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtn4rl1Q8K0S5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Gm9013-201ENSMUST00000132939 882 ntBASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Il3ra-202ENSMUST00000223589 738 ntBASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4rl1Q8K0S5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rtn4rl1Q8K0S5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm17971-201ENSMUST00000190239 806 ntBASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Gm7213-201ENSMUST00000215977 950 ntBASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4rl1Q8K0S5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms