Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Depdc1aQ8CIG0 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.08■□□□□ 0.8
Depdc1aQ8CIG0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Depdc1aQ8CIG0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Depdc1aQ8CIG0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Depdc1aQ8CIG0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Depdc1aQ8CIG0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.07■□□□□ 0.8
Depdc1aQ8CIG0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Depdc1aQ8CIG0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Idnk-204ENSMUST00000226010 1898 ntBASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Depdc1aQ8CIG0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Depdc1aQ8CIG0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Depdc1aQ8CIG0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Gm24841-201ENSMUST00000158676 357 ntBASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Depdc1aQ8CIG0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Depdc1aQ8CIG0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Depdc1aQ8CIG0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Depdc1aQ8CIG0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Depdc1aQ8CIG0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Depdc1aQ8CIG0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.01■□□□□ 0.79
Depdc1aQ8CIG0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Depdc1aQ8CIG0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Depdc1aQ8CIG0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Depdc1aQ8CIG0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms