Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clip4Q8CI96 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.88■□□□□ 0.45
Clip4Q8CI96 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip4Q8CI96 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Gm12527-201ENSMUST00000117967 564 ntBASIC17.87■□□□□ 0.45
Clip4Q8CI96 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clip4Q8CI96 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.86■□□□□ 0.45
Clip4Q8CI96 Gm20049-201ENSMUST00000219950 730 ntBASIC17.86■□□□□ 0.45
Clip4Q8CI96 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Clip4Q8CI96 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.86■□□□□ 0.45
Clip4Q8CI96 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip4Q8CI96 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.85■□□□□ 0.45
Clip4Q8CI96 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip4Q8CI96 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Gm10653-202ENSMUST00000139570 835 ntBASIC17.84■□□□□ 0.45
Clip4Q8CI96 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms