Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm40848-201ENSMUST00000221998 324 ntBASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc28bQ8CEG5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc28bQ8CEG5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc28bQ8CEG5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc28bQ8CEG5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc28bQ8CEG5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.52■□□□□ 0.39
Ccdc28bQ8CEG5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28bQ8CEG5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28bQ8CEG5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28bQ8CEG5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28bQ8CEG5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28bQ8CEG5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc28bQ8CEG5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms