Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Pabpn1Q8CCS6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pabpn1Q8CCS6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Pabpn1Q8CCS6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pabpn1Q8CCS6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pabpn1Q8CCS6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 AC108846.1-201ENSMUST00000214531 513 ntBASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pabpn1Q8CCS6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Pabpn1Q8CCS6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Pabpn1Q8CCS6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pabpn1Q8CCS6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Pabpn1Q8CCS6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC27.7■■■□□ 2.02
Pabpn1Q8CCS6 AC225888.1-201ENSMUST00000227184 728 ntBASIC27.7■■■□□ 2.02
Pabpn1Q8CCS6 AC158982.1-201ENSMUST00000228377 901 ntBASIC27.7■■■□□ 2.02
Pabpn1Q8CCS6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pabpn1Q8CCS6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Pabpn1Q8CCS6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pabpn1Q8CCS6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC27.69■■■□□ 2.02
Pabpn1Q8CCS6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
Pabpn1Q8CCS6 Gm14822-201ENSMUST00000122247 291 ntBASIC27.69■■■□□ 2.02
Pabpn1Q8CCS6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Pabpn1Q8CCS6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pabpn1Q8CCS6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Pabpn1Q8CCS6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Mir5126-201ENSMUST00000175513 77 ntBASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pabpn1Q8CCS6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 Gm10175-201ENSMUST00000086013 645 ntBASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pabpn1Q8CCS6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pabpn1Q8CCS6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pabpn1Q8CCS6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Pabpn1Q8CCS6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
Pabpn1Q8CCS6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC27.66■■■□□ 2.02
Pabpn1Q8CCS6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pabpn1Q8CCS6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 Gm14494-201ENSMUST00000118786 435 ntBASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Pabpn1Q8CCS6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pabpn1Q8CCS6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
Pabpn1Q8CCS6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.01
Pabpn1Q8CCS6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Pabpn1Q8CCS6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 AC160338.1-201ENSMUST00000214232 705 ntBASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pabpn1Q8CCS6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms