Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf31Q8CCF0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Gm15565-201ENSMUST00000118890 427 ntBASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Gm11643-201ENSMUST00000119578 864 ntBASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Prpf31Q8CCF0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf31Q8CCF0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf31Q8CCF0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
Prpf31Q8CCF0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Gm5417-201ENSMUST00000079706 384 ntBASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf31Q8CCF0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf31Q8CCF0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Gm21814-202ENSMUST00000203277 873 ntBASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf31Q8CCF0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf31Q8CCF0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms