Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Mir6349-201ENSMUST00000184059 97 ntBASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim9Q8C7M3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Gm10418-201ENSMUST00000100943 576 ntBASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim9Q8C7M3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trim9Q8C7M3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim9Q8C7M3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim9Q8C7M3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim9Q8C7M3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
Trim9Q8C7M3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim9Q8C7M3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim9Q8C7M3 Gm15375-201ENSMUST00000119510 849 ntBASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim9Q8C7M3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim9Q8C7M3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim9Q8C7M3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Gm13401-201ENSMUST00000117074 291 ntBASIC19.56■□□□□ 0.72
Trim9Q8C7M3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim9Q8C7M3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Gm13158-201ENSMUST00000122007 736 ntBASIC19.55■□□□□ 0.72
Trim9Q8C7M3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Gm37856-201ENSMUST00000191634 999 ntBASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim9Q8C7M3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Mir8112-201ENSMUST00000184382 131 ntBASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms