Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp20Q8C6M1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.62■□□□□ 0.73
Usp20Q8C6M1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp20Q8C6M1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.61■□□□□ 0.73
Usp20Q8C6M1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp20Q8C6M1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp20Q8C6M1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Gm10517-202ENSMUST00000192970 758 ntBASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp20Q8C6M1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp20Q8C6M1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp20Q8C6M1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.58■□□□□ 0.73
Usp20Q8C6M1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp20Q8C6M1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp20Q8C6M1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms