Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp43Q8BUM9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Usp43Q8BUM9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp43Q8BUM9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp43Q8BUM9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Usp43Q8BUM9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Usp43Q8BUM9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.96■□□□□ 0.46
Usp43Q8BUM9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp43Q8BUM9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp43Q8BUM9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp43Q8BUM9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp43Q8BUM9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms