Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Gm4974-201ENSMUST00000209974 875 ntBASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr7Q8BU04 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ubr7Q8BU04 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Gm13836-201ENSMUST00000121159 501 ntBASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ubr7Q8BU04 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubr7Q8BU04 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ubr7Q8BU04 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubr7Q8BU04 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ubr7Q8BU04 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms