Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Fst-202ENSMUST00000223640 2612 ntBASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lig4Q8BTF7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lig4Q8BTF7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lig4Q8BTF7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.77■□□□□ 0.6
Lig4Q8BTF7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lig4Q8BTF7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lig4Q8BTF7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lig4Q8BTF7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lig4Q8BTF7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.77■□□□□ 0.59
Lig4Q8BTF7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Mir6982-201ENSMUST00000184354 68 ntBASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lig4Q8BTF7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lig4Q8BTF7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms