Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rd3Q8BRE0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Gm6659-201ENSMUST00000174752 547 ntBASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Gm27463-201ENSMUST00000183569 57 ntBASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rd3Q8BRE0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rd3Q8BRE0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rd3Q8BRE0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rd3Q8BRE0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.83■□□□□ 0.61
Rd3Q8BRE0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.83■□□□□ 0.61
Rd3Q8BRE0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rd3Q8BRE0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.83■□□□□ 0.6
Rd3Q8BRE0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Gm21362-201ENSMUST00000194272 928 ntBASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rd3Q8BRE0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Gm7367-201ENSMUST00000057611 492 ntBASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rd3Q8BRE0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rd3Q8BRE0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms