Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm24841-201ENSMUST00000158676 357 ntBASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Gm22697-201ENSMUST00000175194 63 ntBASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Smarcal1Q8BJL0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Gm33142-201ENSMUST00000193913 867 ntBASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcal1Q8BJL0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Gm25016-201ENSMUST00000158399 131 ntBASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Smarcal1Q8BJL0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smarcal1Q8BJL0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Tgds-204ENSMUST00000228543 1594 ntBASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Gm7638-201ENSMUST00000121348 967 ntBASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smarcal1Q8BJL0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Smarcal1Q8BJL0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Smarcal1Q8BJL0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcal1Q8BJL0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcal1Q8BJL0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcal1Q8BJL0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms