Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Clrn3Q8BHH8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn3Q8BHH8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn3Q8BHH8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Flg-201ENSMUST00000050758 1488 ntBASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Gm4968-201ENSMUST00000071458 858 ntBASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.62■□□□□ 0.25
Clrn3Q8BHH8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clrn3Q8BHH8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Tgds-204ENSMUST00000228543 1594 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms