Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Depdc1bQ8BH88 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Depdc1bQ8BH88 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Depdc1bQ8BH88 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Depdc1bQ8BH88 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Depdc1bQ8BH88 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Depdc1bQ8BH88 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.33■□□□□ 0.68
Depdc1bQ8BH88 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Gm10812-201ENSMUST00000099864 546 ntBASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Depdc1bQ8BH88 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Depdc1bQ8BH88 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Depdc1bQ8BH88 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Gm12896-201ENSMUST00000118430 226 ntBASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Depdc1bQ8BH88 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Gm27275-201ENSMUST00000184318 272 ntBASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Gm2559-201ENSMUST00000201323 363 ntBASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Depdc1bQ8BH88 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Gm10252-201ENSMUST00000209541 832 ntBASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Depdc1bQ8BH88 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Depdc1bQ8BH88 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Depdc1bQ8BH88 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
Depdc1bQ8BH88 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Depdc1bQ8BH88 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.26■□□□□ 0.67
Depdc1bQ8BH88 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Depdc1bQ8BH88 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms