Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Gm13534-201ENSMUST00000121169 513 ntBASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim6Q8BGE7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim6Q8BGE7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim6Q8BGE7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim6Q8BGE7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim6Q8BGE7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim6Q8BGE7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim6Q8BGE7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim6Q8BGE7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim6Q8BGE7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim6Q8BGE7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim6Q8BGE7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim6Q8BGE7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms