Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Gm38027-201ENSMUST00000192315 235 ntBASIC21.29■■□□□ 1
Sptlc3Q8BG54 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.29■■□□□ 1
Sptlc3Q8BG54 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Gm10175-202ENSMUST00000208752 441 ntBASIC21.29■■□□□ 1
Sptlc3Q8BG54 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.29■■□□□ 1
Sptlc3Q8BG54 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sptlc3Q8BG54 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Gm10418-201ENSMUST00000100943 576 ntBASIC21.27■■□□□ 1
Sptlc3Q8BG54 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sptlc3Q8BG54 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Gm7889-201ENSMUST00000185591 958 ntBASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sptlc3Q8BG54 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Sptlc3Q8BG54 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sptlc3Q8BG54 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sptlc3Q8BG54 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sptlc3Q8BG54 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sptlc3Q8BG54 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.23■□□□□ 0.99
Sptlc3Q8BG54 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.23■□□□□ 0.99
Sptlc3Q8BG54 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sptlc3Q8BG54 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Sptlc3Q8BG54 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Idnk-204ENSMUST00000226010 1898 ntBASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sptlc3Q8BG54 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms