Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim36Q80WG7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.16■□□□□ 0.34
Trim36Q80WG7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.15■□□□□ 0.34
Trim36Q80WG7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim36Q80WG7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.14■□□□□ 0.34
Trim36Q80WG7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim36Q80WG7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim36Q80WG7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.14■□□□□ 0.33
Trim36Q80WG7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim36Q80WG7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Gm8969-201ENSMUST00000199694 526 ntBASIC17.13■□□□□ 0.33
Trim36Q80WG7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim36Q80WG7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.12■□□□□ 0.33
Trim36Q80WG7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim36Q80WG7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms