Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.47■□□□□ 0.87
Prpf40bQ80W14 AA414768-201ENSMUST00000121924 1257 ntBASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Gm3375-201ENSMUST00000203929 796 ntBASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Timm23-208ENSMUST00000226683 750 ntBASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf40bQ80W14 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Gm9103-201ENSMUST00000119371 405 ntBASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf40bQ80W14 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Gm42545-201ENSMUST00000202755 922 ntBASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Gm18025-201ENSMUST00000221733 862 ntBASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf40bQ80W14 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Rarb-207ENSMUST00000225921 2756 ntBASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf40bQ80W14 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf40bQ80W14 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Gm18959-201ENSMUST00000208954 655 ntBASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf40bQ80W14 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Ank2-226ENSMUST00000189368 339 ntBASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Gm10138-203ENSMUST00000206952 366 ntBASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Prpf40bQ80W14 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms