Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Gm6659-201ENSMUST00000174752 547 ntBASIC19.43■□□□□ 0.7
Ush1gQ80T11 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.43■□□□□ 0.7
Ush1gQ80T11 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Gm7367-201ENSMUST00000057611 492 ntBASIC19.43■□□□□ 0.7
Ush1gQ80T11 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.43■□□□□ 0.7
Ush1gQ80T11 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Ush1gQ80T11 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.42■□□□□ 0.7
Ush1gQ80T11 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ush1gQ80T11 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ush1gQ80T11 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.4■□□□□ 0.7
Ush1gQ80T11 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ush1gQ80T11 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.4■□□□□ 0.7
Ush1gQ80T11 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ush1gQ80T11 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ush1gQ80T11 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ush1gQ80T11 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ush1gQ80T11 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1gQ80T11 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1gQ80T11 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1gQ80T11 Gm10819-201ENSMUST00000099988 561 ntBASIC19.37■□□□□ 0.69
Ush1gQ80T11 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.37■□□□□ 0.69
Ush1gQ80T11 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Ush1gQ80T11 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ush1gQ80T11 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ush1gQ80T11 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ush1gQ80T11 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ush1gQ80T11 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ush1gQ80T11 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.36■□□□□ 0.69
Ush1gQ80T11 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ush1gQ80T11 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Ush1gQ80T11 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ush1gQ80T11 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms