Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Ank2-226ENSMUST00000189368 339 ntBASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf38bQ80SY5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Prpf38bQ80SY5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prpf38bQ80SY5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prpf38bQ80SY5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prpf38bQ80SY5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Prpf38bQ80SY5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms