Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pif1Q80SX8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pif1Q80SX8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.35■□□□□ 0.21
Pif1Q80SX8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.35■□□□□ 0.21
Pif1Q80SX8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.35■□□□□ 0.21
Pif1Q80SX8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pif1Q80SX8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Gm6659-201ENSMUST00000174752 547 ntBASIC16.34■□□□□ 0.21
Pif1Q80SX8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pif1Q80SX8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pif1Q80SX8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.34■□□□□ 0.21
Pif1Q80SX8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Pif1Q80SX8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pif1Q80SX8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.33■□□□□ 0.21
Pif1Q80SX8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pif1Q80SX8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pif1Q80SX8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Gm21362-201ENSMUST00000194272 928 ntBASIC16.33■□□□□ 0.2
Pif1Q80SX8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pif1Q80SX8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.32■□□□□ 0.2
Pif1Q80SX8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.32■□□□□ 0.2
Pif1Q80SX8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pif1Q80SX8 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.31■□□□□ 0.2
Pif1Q80SX8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Gm12085-201ENSMUST00000119263 940 ntBASIC16.31■□□□□ 0.2
Pif1Q80SX8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.31■□□□□ 0.2
Pif1Q80SX8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.31■□□□□ 0.2
Pif1Q80SX8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms