Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpm4Q7TN37 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trpm4Q7TN37 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trpm4Q7TN37 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trpm4Q7TN37 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Gm26524-201ENSMUST00000192339 390 ntBASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.14■□□□□ 0.49
Trpm4Q7TN37 Tgds-204ENSMUST00000228543 1594 ntBASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpm4Q7TN37 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trpm4Q7TN37 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpm4Q7TN37 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.1■□□□□ 0.49
Trpm4Q7TN37 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trpm4Q7TN37 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms