Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Timd4Q6U7R4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Timd4Q6U7R4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Timd4Q6U7R4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Timd4Q6U7R4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Gm10138-203ENSMUST00000206952 366 ntBASIC16.49■□□□□ 0.23
Timd4Q6U7R4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Rarb-207ENSMUST00000225921 2756 ntBASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Idnk-204ENSMUST00000226010 1898 ntBASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Timd4Q6U7R4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Mir2861-201ENSMUST00000175539 82 ntBASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Timd4Q6U7R4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Timd4Q6U7R4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Timd4Q6U7R4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Timd4Q6U7R4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Timd4Q6U7R4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms