Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Dhx40Q6PE54 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.75■□□□□ 0.75
Dhx40Q6PE54 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dhx40Q6PE54 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Dhx40Q6PE54 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Dhx40Q6PE54 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dhx40Q6PE54 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dhx40Q6PE54 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.74
Dhx40Q6PE54 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dhx40Q6PE54 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Gm7291-201ENSMUST00000199147 382 ntBASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Gm18671-201ENSMUST00000214826 683 ntBASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Dhx40Q6PE54 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dhx40Q6PE54 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms