Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Il3ra-202ENSMUST00000223589 738 ntBASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Chd4Q6PDQ2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chd4Q6PDQ2 Gm17661-201ENSMUST00000170317 270 ntBASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Gm7284-201ENSMUST00000131667 944 ntBASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chd4Q6PDQ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chd4Q6PDQ2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chd4Q6PDQ2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.3■■□□□ 1.32
Chd4Q6PDQ2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chd4Q6PDQ2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chd4Q6PDQ2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chd4Q6PDQ2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chd4Q6PDQ2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Gm27741-201ENSMUST00000185060 237 ntBASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Gm3272-201ENSMUST00000181181 1229 ntBASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Gm10566-201ENSMUST00000086739 996 ntBASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Gm6627-201ENSMUST00000218299 2386 ntBASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
Chd4Q6PDQ2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Gm17971-201ENSMUST00000190239 806 ntBASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chd4Q6PDQ2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Mir8112-201ENSMUST00000184382 131 ntBASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chd4Q6PDQ2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Chd4Q6PDQ2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Fst-202ENSMUST00000223640 2612 ntBASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.26■■□□□ 1.31
Chd4Q6PDQ2 Gm13474-201ENSMUST00000122466 815 ntBASIC23.25■■□□□ 1.31
Chd4Q6PDQ2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Chd4Q6PDQ2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd4Q6PDQ2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd4Q6PDQ2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC23.25■■□□□ 1.31
Chd4Q6PDQ2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chd4Q6PDQ2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms