Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cachd1Q6PDJ1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cachd1Q6PDJ1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Gm10052-201ENSMUST00000168019 960 ntBASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Gm2651-201ENSMUST00000203560 838 ntBASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Gm7729-201ENSMUST00000050143 801 ntBASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cachd1Q6PDJ1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Gm12085-201ENSMUST00000119263 940 ntBASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Gm1401-201ENSMUST00000122048 772 ntBASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cachd1Q6PDJ1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Zfp783-201ENSMUST00000095946 670 ntBASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cachd1Q6PDJ1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cachd1Q6PDJ1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cachd1Q6PDJ1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cachd1Q6PDJ1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cachd1Q6PDJ1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms