Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShbQ6PD21 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShbQ6PD21 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ShbQ6PD21 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.29■□□□□ 0.68
ShbQ6PD21 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.29■□□□□ 0.68
ShbQ6PD21 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.29■□□□□ 0.68
ShbQ6PD21 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShbQ6PD21 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ShbQ6PD21 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ShbQ6PD21 Gm12895-201ENSMUST00000122214 226 ntBASIC19.28■□□□□ 0.68
ShbQ6PD21 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.28■□□□□ 0.68
ShbQ6PD21 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.28■□□□□ 0.68
ShbQ6PD21 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShbQ6PD21 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShbQ6PD21 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShbQ6PD21 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShbQ6PD21 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ShbQ6PD21 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.27■□□□□ 0.68
ShbQ6PD21 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.27■□□□□ 0.68
ShbQ6PD21 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.27■□□□□ 0.68
ShbQ6PD21 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ShbQ6PD21 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ShbQ6PD21 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ShbQ6PD21 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShbQ6PD21 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShbQ6PD21 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ShbQ6PD21 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShbQ6PD21 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ShbQ6PD21 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShbQ6PD21 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.26■□□□□ 0.67
ShbQ6PD21 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ShbQ6PD21 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ShbQ6PD21 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
ShbQ6PD21 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Gm11452-201ENSMUST00000122376 690 ntBASIC19.25■□□□□ 0.67
ShbQ6PD21 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.25■□□□□ 0.67
ShbQ6PD21 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.25■□□□□ 0.67
ShbQ6PD21 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ShbQ6PD21 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ShbQ6PD21 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ShbQ6PD21 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShbQ6PD21 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ShbQ6PD21 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.24■□□□□ 0.67
ShbQ6PD21 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ShbQ6PD21 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.24■□□□□ 0.67
ShbQ6PD21 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.23■□□□□ 0.67
ShbQ6PD21 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.23■□□□□ 0.67
ShbQ6PD21 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.23■□□□□ 0.67
ShbQ6PD21 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.23■□□□□ 0.67
ShbQ6PD21 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.23■□□□□ 0.67
ShbQ6PD21 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ShbQ6PD21 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.22■□□□□ 0.67
ShbQ6PD21 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShbQ6PD21 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShbQ6PD21 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ShbQ6PD21 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShbQ6PD21 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ShbQ6PD21 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.22■□□□□ 0.67
ShbQ6PD21 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.22■□□□□ 0.67
ShbQ6PD21 Gm18206-201ENSMUST00000207027 926 ntBASIC19.22■□□□□ 0.67
ShbQ6PD21 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShbQ6PD21 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShbQ6PD21 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ShbQ6PD21 Gm29791-202ENSMUST00000207888 369 ntBASIC19.21■□□□□ 0.67
ShbQ6PD21 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ShbQ6PD21 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms