Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Krt39Q6IFX4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Krt39Q6IFX4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Krt39Q6IFX4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt39Q6IFX4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt39Q6IFX4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt39Q6IFX4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Krt39Q6IFX4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt39Q6IFX4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Krt39Q6IFX4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt39Q6IFX4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt39Q6IFX4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Krt39Q6IFX4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Krt39Q6IFX4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.58■□□□□ 0.72
Krt39Q6IFX4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.58■□□□□ 0.72
Krt39Q6IFX4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Krt39Q6IFX4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Krt39Q6IFX4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Krt39Q6IFX4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms