Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Gm15378-201ENSMUST00000121894 207 ntBASIC17.04■□□□□ 0.32
Sdc3Q64519 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Sdc3Q64519 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.04■□□□□ 0.32
Sdc3Q64519 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.03■□□□□ 0.32
Sdc3Q64519 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.03■□□□□ 0.32
Sdc3Q64519 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sdc3Q64519 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc3Q64519 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.02■□□□□ 0.32
Sdc3Q64519 Mir6982-201ENSMUST00000184354 68 ntBASIC17.02■□□□□ 0.32
Sdc3Q64519 Gm38285-201ENSMUST00000192928 922 ntBASIC17.02■□□□□ 0.32
Sdc3Q64519 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.02■□□□□ 0.32
Sdc3Q64519 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc3Q64519 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc3Q64519 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.02■□□□□ 0.31
Sdc3Q64519 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc3Q64519 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc3Q64519 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.01■□□□□ 0.31
Sdc3Q64519 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sdc3Q64519 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sdc3Q64519 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.01■□□□□ 0.31
Sdc3Q64519 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.01■□□□□ 0.31
Sdc3Q64519 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sdc3Q64519 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc3Q64519 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sdc3Q64519 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17■□□□□ 0.31
Sdc3Q64519 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sdc3Q64519 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17■□□□□ 0.31
Sdc3Q64519 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17■□□□□ 0.31
Sdc3Q64519 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sdc3Q64519 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sdc3Q64519 Fst-202ENSMUST00000223640 2612 ntBASIC17■□□□□ 0.31
Sdc3Q64519 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.99■□□□□ 0.31
Sdc3Q64519 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdc3Q64519 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Sdc3Q64519 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdc3Q64519 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sdc3Q64519 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sdc3Q64519 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sdc3Q64519 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.99■□□□□ 0.31
Sdc3Q64519 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdc3Q64519 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdc3Q64519 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.99■□□□□ 0.31
Sdc3Q64519 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.99■□□□□ 0.31
Sdc3Q64519 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.99■□□□□ 0.31
Sdc3Q64519 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sdc3Q64519 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.99■□□□□ 0.31
Sdc3Q64519 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.99■□□□□ 0.31
Sdc3Q64519 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms