Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Clcn1Q64347 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.47■■□□□ 1.19
Clcn1Q64347 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.47■■□□□ 1.19
Clcn1Q64347 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.47■■□□□ 1.19
Clcn1Q64347 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Mir5130-201ENSMUST00000175160 84 ntBASIC22.47■■□□□ 1.19
Clcn1Q64347 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.47■■□□□ 1.19
Clcn1Q64347 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.47■■□□□ 1.19
Clcn1Q64347 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 AC108858.1-201ENSMUST00000228461 1498 ntBASIC22.47■■□□□ 1.19
Clcn1Q64347 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Clcn1Q64347 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Grk6-206ENSMUST00000224995 2971 ntBASIC22.46■■□□□ 1.19
Clcn1Q64347 AA414768-201ENSMUST00000121924 1257 ntBASIC22.46■■□□□ 1.19
Clcn1Q64347 Gm27463-201ENSMUST00000183569 57 ntBASIC22.46■■□□□ 1.19
Clcn1Q64347 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.46■■□□□ 1.19
Clcn1Q64347 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Clcn1Q64347 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.46■■□□□ 1.19
Clcn1Q64347 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Clcn1Q64347 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Clcn1Q64347 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.45■■□□□ 1.18
Clcn1Q64347 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Clcn1Q64347 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Clcn1Q64347 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Clcn1Q64347 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Clcn1Q64347 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Clcn1Q64347 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Clcn1Q64347 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Clcn1Q64347 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn1Q64347 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn1Q64347 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn1Q64347 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn1Q64347 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn1Q64347 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Clcn1Q64347 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn1Q64347 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Clcn1Q64347 AC121961.1-201ENSMUST00000218594 1779 ntBASIC22.44■■□□□ 1.18
Clcn1Q64347 Gm35558-201ENSMUST00000222675 2219 ntBASIC22.44■■□□□ 1.18
Clcn1Q64347 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Clcn1Q64347 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.44■■□□□ 1.18
Clcn1Q64347 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Clcn1Q64347 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC22.43■■□□□ 1.18
Clcn1Q64347 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Clcn1Q64347 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Clcn1Q64347 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Clcn1Q64347 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC22.43■■□□□ 1.18
Clcn1Q64347 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC22.43■■□□□ 1.18
Clcn1Q64347 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Clcn1Q64347 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Clcn1Q64347 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Clcn1Q64347 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC22.42■■□□□ 1.18
Clcn1Q64347 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Clcn1Q64347 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Clcn1Q64347 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Clcn1Q64347 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Clcn1Q64347 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn1Q64347 BC021767-201ENSMUST00000126387 1716 ntBASIC22.4■■□□□ 1.18
Clcn1Q64347 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Clcn1Q64347 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms