Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sqstm1Q64337 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sqstm1Q64337 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sqstm1Q64337 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sqstm1Q64337 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sqstm1Q64337 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sqstm1Q64337 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sqstm1Q64337 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.8■□□□□ 0.12
Sqstm1Q64337 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sqstm1Q64337 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Dancr-204ENSMUST00000132389 2347 ntBASIC15.79■□□□□ 0.12
Sqstm1Q64337 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.79■□□□□ 0.12
Sqstm1Q64337 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sqstm1Q64337 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sqstm1Q64337 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sqstm1Q64337 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.77■□□□□ 0.12
Sqstm1Q64337 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.77■□□□□ 0.12
Sqstm1Q64337 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sqstm1Q64337 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.77■□□□□ 0.11
Sqstm1Q64337 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.77■□□□□ 0.11
Sqstm1Q64337 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Sqstm1Q64337 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sqstm1Q64337 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sqstm1Q64337 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sqstm1Q64337 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sqstm1Q64337 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sqstm1Q64337 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms