Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sycp1Q62209 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sycp1Q62209 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sycp1Q62209 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sycp1Q62209 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sycp1Q62209 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sycp1Q62209 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sycp1Q62209 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sycp1Q62209 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sycp1Q62209 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sycp1Q62209 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sycp1Q62209 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sycp1Q62209 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sycp1Q62209 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sycp1Q62209 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.9■□□□□ 0.78
Sycp1Q62209 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.9■□□□□ 0.78
Sycp1Q62209 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Sycp1Q62209 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sycp1Q62209 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sycp1Q62209 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 Gm2399-201ENSMUST00000104944 225 ntBASIC19.89■□□□□ 0.77
Sycp1Q62209 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.89■□□□□ 0.77
Sycp1Q62209 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.89■□□□□ 0.77
Sycp1Q62209 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.89■□□□□ 0.77
Sycp1Q62209 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sycp1Q62209 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sycp1Q62209 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.88■□□□□ 0.77
Sycp1Q62209 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.88■□□□□ 0.77
Sycp1Q62209 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.88■□□□□ 0.77
Sycp1Q62209 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.88■□□□□ 0.77
Sycp1Q62209 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.88■□□□□ 0.77
Sycp1Q62209 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sycp1Q62209 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Sycp1Q62209 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.87■□□□□ 0.77
Sycp1Q62209 Gm12896-201ENSMUST00000118430 226 ntBASIC19.87■□□□□ 0.77
Sycp1Q62209 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sycp1Q62209 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.86■□□□□ 0.77
Sycp1Q62209 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.86■□□□□ 0.77
Sycp1Q62209 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.86■□□□□ 0.77
Sycp1Q62209 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Gm2559-201ENSMUST00000201323 363 ntBASIC19.86■□□□□ 0.77
Sycp1Q62209 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Sycp1Q62209 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Sycp1Q62209 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sycp1Q62209 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.86■□□□□ 0.77
Sycp1Q62209 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sycp1Q62209 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sycp1Q62209 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sycp1Q62209 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sycp1Q62209 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Sycp1Q62209 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sycp1Q62209 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sycp1Q62209 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sycp1Q62209 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms