Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn9aQ62205 Mir3081-201ENSMUST00000175305 84 ntBASIC21.02■□□□□ 0.96
Scn9aQ62205 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn9aQ62205 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn9aQ62205 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.01■□□□□ 0.95
Scn9aQ62205 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Scn9aQ62205 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.01■□□□□ 0.95
Scn9aQ62205 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Scn9aQ62205 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Gm9731-201ENSMUST00000209480 747 ntBASIC21.01■□□□□ 0.95
Scn9aQ62205 Gm5867-201ENSMUST00000063197 592 ntBASIC21.01■□□□□ 0.95
Scn9aQ62205 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn9aQ62205 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21■□□□□ 0.95
Scn9aQ62205 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21■□□□□ 0.95
Scn9aQ62205 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn9aQ62205 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn9aQ62205 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Scn9aQ62205 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Scn9aQ62205 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21■□□□□ 0.95
Scn9aQ62205 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn9aQ62205 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.99■□□□□ 0.95
Scn9aQ62205 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Scn9aQ62205 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Scn9aQ62205 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Scn9aQ62205 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn9aQ62205 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.98■□□□□ 0.95
Scn9aQ62205 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Scn9aQ62205 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.98■□□□□ 0.95
Scn9aQ62205 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn9aQ62205 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn9aQ62205 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.98■□□□□ 0.95
Scn9aQ62205 AW822252-206ENSMUST00000208904 237 ntBASIC20.98■□□□□ 0.95
Scn9aQ62205 Il3ra-202ENSMUST00000223589 738 ntBASIC20.98■□□□□ 0.95
Scn9aQ62205 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Scn9aQ62205 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn9aQ62205 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Scn9aQ62205 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Scn9aQ62205 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn9aQ62205 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.97■□□□□ 0.95
Scn9aQ62205 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.97■□□□□ 0.95
Scn9aQ62205 Gm43514-201ENSMUST00000198852 424 ntBASIC20.97■□□□□ 0.95
Scn9aQ62205 Gm10566-201ENSMUST00000086739 996 ntBASIC20.97■□□□□ 0.95
Scn9aQ62205 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Scn9aQ62205 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.97■□□□□ 0.95
Scn9aQ62205 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Scn9aQ62205 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn9aQ62205 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Scn9aQ62205 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.96■□□□□ 0.95
Scn9aQ62205 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Scn9aQ62205 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.96■□□□□ 0.95
Scn9aQ62205 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Scn9aQ62205 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Scn9aQ62205 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn9aQ62205 Gm37025-201ENSMUST00000195159 829 ntBASIC20.96■□□□□ 0.95
Scn9aQ62205 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Scn9aQ62205 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Scn9aQ62205 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 Gm10418-201ENSMUST00000100943 576 ntBASIC20.95■□□□□ 0.94
Scn9aQ62205 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.95■□□□□ 0.94
Scn9aQ62205 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Scn9aQ62205 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 Notumos-201ENSMUST00000151998 2659 ntBASIC20.95■□□□□ 0.94
Scn9aQ62205 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Scn9aQ62205 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms