Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm13559-201ENSMUST00000120476 863 ntBASIC13.61□□□□□ -0.23
Notch3Q61982 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Notch3Q61982 Gm43183-201ENSMUST00000200632 547 ntBASIC13.61□□□□□ -0.23
Notch3Q61982 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Notch3Q61982 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Notch3Q61982 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Notch3Q61982 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Notch3Q61982 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.6□□□□□ -0.23
Notch3Q61982 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Notch3Q61982 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Notch3Q61982 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Notch3Q61982 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.59□□□□□ -0.23
Notch3Q61982 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Notch3Q61982 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.59□□□□□ -0.23
Notch3Q61982 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.59□□□□□ -0.23
Notch3Q61982 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.59□□□□□ -0.23
Notch3Q61982 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.59□□□□□ -0.23
Notch3Q61982 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.59□□□□□ -0.23
Notch3Q61982 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Notch3Q61982 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Notch3Q61982 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Notch3Q61982 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Notch3Q61982 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Notch3Q61982 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Notch3Q61982 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Notch3Q61982 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.58□□□□□ -0.23
Notch3Q61982 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Notch3Q61982 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.58□□□□□ -0.24
Notch3Q61982 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Notch3Q61982 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.58□□□□□ -0.24
Notch3Q61982 Gm7889-201ENSMUST00000185591 958 ntBASIC13.58□□□□□ -0.24
Notch3Q61982 Gm42545-201ENSMUST00000202755 922 ntBASIC13.58□□□□□ -0.24
Notch3Q61982 Zfp783-201ENSMUST00000095946 670 ntBASIC13.58□□□□□ -0.24
Notch3Q61982 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Notch3Q61982 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Notch3Q61982 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Notch3Q61982 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.57□□□□□ -0.24
Notch3Q61982 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Notch3Q61982 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.57□□□□□ -0.24
Notch3Q61982 Odf3b-204ENSMUST00000227834 930 ntBASIC13.57□□□□□ -0.24
Notch3Q61982 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.57□□□□□ -0.24
Notch3Q61982 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms