Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 Rps24-207ENSMUST00000224568 714 ntBASIC14.41□□□□□ -0.1
Zic4Q61467 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.41□□□□□ -0.1
Zic4Q61467 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.41□□□□□ -0.1
Zic4Q61467 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Zic4Q61467 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Mir7075-201ENSMUST00000184187 82 ntBASIC14.4□□□□□ -0.1
Zic4Q61467 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Zic4Q61467 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Zic4Q61467 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Zic4Q61467 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Zic4Q61467 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Zic4Q61467 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.39□□□□□ -0.11
Zic4Q61467 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.39□□□□□ -0.11
Zic4Q61467 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Zic4Q61467 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Zic4Q61467 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Zic4Q61467 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.38□□□□□ -0.11
Zic4Q61467 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Zic4Q61467 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Zic4Q61467 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Zic4Q61467 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Zic4Q61467 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Zic4Q61467 Gm13146-201ENSMUST00000118508 780 ntBASIC14.37□□□□□ -0.11
Zic4Q61467 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.37□□□□□ -0.11
Zic4Q61467 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.37□□□□□ -0.11
Zic4Q61467 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Gm9847-201ENSMUST00000052528 599 ntBASIC14.37□□□□□ -0.11
Zic4Q61467 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Zic4Q61467 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Zic4Q61467 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.37□□□□□ -0.11
Zic4Q61467 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Zic4Q61467 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Zic4Q61467 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.36□□□□□ -0.11
Zic4Q61467 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Zic4Q61467 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms