Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.52■□□□□ 0.56
Smarcd1Q61466 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.52■□□□□ 0.56
Smarcd1Q61466 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.52■□□□□ 0.56
Smarcd1Q61466 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.52■□□□□ 0.56
Smarcd1Q61466 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.52■□□□□ 0.56
Smarcd1Q61466 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcd1Q61466 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcd1Q61466 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcd1Q61466 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smarcd1Q61466 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcd1Q61466 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcd1Q61466 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcd1Q61466 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcd1Q61466 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smarcd1Q61466 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.51■□□□□ 0.55
Smarcd1Q61466 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.51■□□□□ 0.55
Smarcd1Q61466 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smarcd1Q61466 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Gm13401-201ENSMUST00000117074 291 ntBASIC18.5■□□□□ 0.55
Smarcd1Q61466 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Gm37055-201ENSMUST00000191866 133 ntBASIC18.5■□□□□ 0.55
Smarcd1Q61466 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smarcd1Q61466 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Gm10517-202ENSMUST00000192970 758 ntBASIC18.49■□□□□ 0.55
Smarcd1Q61466 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smarcd1Q61466 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smarcd1Q61466 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.48■□□□□ 0.55
Smarcd1Q61466 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.48■□□□□ 0.55
Smarcd1Q61466 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.48■□□□□ 0.55
Smarcd1Q61466 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Smarcd1Q61466 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.47■□□□□ 0.55
Smarcd1Q61466 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Timm23-208ENSMUST00000226683 750 ntBASIC18.47■□□□□ 0.55
Smarcd1Q61466 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.47■□□□□ 0.55
Smarcd1Q61466 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smarcd1Q61466 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smarcd1Q61466 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms