Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clcn4Q61418 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.36■□□□□ 0.21
Clcn4Q61418 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Clcn4Q61418 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.36■□□□□ 0.21
Clcn4Q61418 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Clcn4Q61418 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clcn4Q61418 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Clcn4Q61418 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn4Q61418 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Clcn4Q61418 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Clcn4Q61418 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.35■□□□□ 0.21
Clcn4Q61418 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Clcn4Q61418 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Gm5408-201ENSMUST00000197998 747 ntBASIC16.35■□□□□ 0.21
Clcn4Q61418 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clcn4Q61418 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.34■□□□□ 0.21
Clcn4Q61418 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.34■□□□□ 0.21
Clcn4Q61418 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.34■□□□□ 0.21
Clcn4Q61418 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.34■□□□□ 0.21
Clcn4Q61418 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clcn4Q61418 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.33■□□□□ 0.21
Clcn4Q61418 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clcn4Q61418 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clcn4Q61418 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn4Q61418 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn4Q61418 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.33■□□□□ 0.2
Clcn4Q61418 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Clcn4Q61418 Gm4968-201ENSMUST00000071458 858 ntBASIC16.33■□□□□ 0.2
Clcn4Q61418 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn4Q61418 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clcn4Q61418 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn4Q61418 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn4Q61418 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn4Q61418 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.33■□□□□ 0.2
Clcn4Q61418 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn4Q61418 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clcn4Q61418 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clcn4Q61418 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.32■□□□□ 0.2
Clcn4Q61418 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.32■□□□□ 0.2
Clcn4Q61418 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.32■□□□□ 0.2
Clcn4Q61418 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn4Q61418 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Clcn4Q61418 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clcn4Q61418 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.31■□□□□ 0.2
Clcn4Q61418 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms