Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Odf3b-204ENSMUST00000227834 930 ntBASIC18.2■□□□□ 0.5
Slc6a4Q60857 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a4Q60857 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a4Q60857 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Gm12085-201ENSMUST00000119263 940 ntBASIC18.18■□□□□ 0.5
Slc6a4Q60857 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Gm29791-202ENSMUST00000207888 369 ntBASIC18.18■□□□□ 0.5
Slc6a4Q60857 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.18■□□□□ 0.5
Slc6a4Q60857 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc6a4Q60857 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a4Q60857 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Gm43799-201ENSMUST00000201845 579 ntBASIC18.16■□□□□ 0.5
Slc6a4Q60857 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.16■□□□□ 0.5
Slc6a4Q60857 Gm30025-201ENSMUST00000218555 728 ntBASIC18.16■□□□□ 0.5
Slc6a4Q60857 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc6a4Q60857 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc6a4Q60857 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a4Q60857 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Gm10418-201ENSMUST00000100943 576 ntBASIC18.15■□□□□ 0.5
Slc6a4Q60857 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Gm4974-201ENSMUST00000209974 875 ntBASIC18.15■□□□□ 0.5
Slc6a4Q60857 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a4Q60857 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc6a4Q60857 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc6a4Q60857 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms