Protein–RNA interactions for Protein: Q60644

Nr1h2, Oxysterols receptor LXR-beta, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h2Q60644 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Nr1h2Q60644 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h2Q60644 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.41■□□□□ 0.38
Nr1h2Q60644 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h2Q60644 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.4■□□□□ 0.38
Nr1h2Q60644 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Gm13168-201ENSMUST00000121771 632 ntBASIC17.4■□□□□ 0.38
Nr1h2Q60644 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h2Q60644 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nr1h2Q60644 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Nr1h2Q60644 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.39■□□□□ 0.37
Nr1h2Q60644 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nr1h2Q60644 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Nr1h2Q60644 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Mir7071-201ENSMUST00000184847 69 ntBASIC17.38■□□□□ 0.37
Nr1h2Q60644 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nr1h2Q60644 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nr1h2Q60644 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nr1h2Q60644 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h2Q60644 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h2Q60644 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h2Q60644 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h2Q60644 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.36■□□□□ 0.37
Nr1h2Q60644 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h2Q60644 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nr1h2Q60644 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms